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- Description:
- : Forests play a major role in the global carbon cycle. Previous studies on the capacity of forests to sequester atmospheric CO2 have mostly focused on carbon uptake, but the roles of carbon turnover time and its spatiotemporal changes remain poorly understood. Here, we used long-term inventory data (1955-2018) from 695 mature forest plots to quantify temporal trends in living vegetation carbon turnover time across tropical, temperate, and cold climate zones, and compared plot data to eight Earth system models (ESMs). Long-term plots consistently showed decreases in living vegetation carbon turnover time, likely driven by increased tree mortality across all major climate zones. Changes in living vegetation carbon turnover time were negatively correlated with CO2 enrichment in both forest plot data and ESM simulations. However, plot-based correlations between living vegetation carbon turnover time and climate drivers such as precipitation and temperature diverged from those of ESM simulations. Our analyses suggest that forest carbon sinks are likely to be constrained by a decrease in living vegetation carbon turnover time, and accurate projections of forest carbon sink dynamics will require an improved representation of tree mortality processes and their sensitivity to climate in ESMs.
- Subject:
- Forestry
- Creator:
- Anderegg, William R.L., Schraub, Marcus, Yu, Kailiang, Gessler, Arthur, Penuelas, Josep, Cailleret, Maxine, Peng, Changhui, Condit, Richard, Ferretti, Marco, Hubbell, Stephen P., Smith, William K., Sardans, Jordi, Levanic, Tom, Zhu, Kai, and Trugman, Anna T.
- Owner:
- KAILIANG YU
- Language:
- English
- Date Uploaded:
- 10/24/2019
- Date Modified:
- 12/09/2021
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/doi:10.7278/S50D-D656-FSP2
-
- Description:
- Weather-related research often requires synthesizing vast amounts of data that need archival solutions that are both economical and viable during and past the lifetime of the project. Public cloud computing services (e.g., from Amazon, Microsoft, or Google) or private clouds managed by research institutions are providing object data storage systems appropriate for long-term archives of such large geophysical data sets. , Current Status: Our research group no longer needs to maintain archives of High Resolution Rapid Refresh (HRRR) model output at the University of Utah since complete publicly-accessible archives of HRRR model output are now available from the Google Cloud Platform and Amazon Web Services (AWS) as part of the NOAA Open Data Program. Google and AWS store the HRRR model output in GRIB2 format, a file type that efficiently stores hundreds of two-dimensional variable fields for a single valid time. Despite the highly compressible nature of GRIB2 files, they are often on the order of several hundred MB each, making high-volume input/output applications challenging due to the memory and compute resources needed to parse these files. With support from the Amazon Sustainability Data Initiative, our group is now creating and maintaining HRRR model output in an optimized format, Zarr, in a publicly-accessible S3 bucket- hrrrzarr. HRRR-Zarr contains sets for each model run of analysis and forecast files sectioned into 96 small chunks for every variable. The structure of the HRRR-Zarr files are designed to allow users the flexibility to access only the data they need through selecting subdomains and parameters of interest without the overhead that comes from accessing numerous GRIB2 files. , and History: This effort began in 2015 to illustrate the use of a private cloud object store developed by the Center for High Performance Computing (CHPC) at the University of Utah. We began archiving thousands of two-dimensional gridded fields (each one containing over 1.9 million values over the contiguous United States) from the High-Resolution Rapid Refresh (HRRR) data assimilation and forecast modeling system. The archive has been used for retrospective analyses of meteorological conditions during high-impact weather events, assessing the accuracy of the HRRR forecasts, and providing initial and boundary conditions for research simulations. The archive has been accessible interactively and through automated download procedures for researchers at other institutions that can be tailored by the user to extract individual two-dimensional grids from within the highly compressed files. Over a thousand users have voluntarily registered to use the HRRR archive at the University of Utah. Our archive has grown to over 130 Tbytes of model output but we no longer need to continue that effort since the GRIB2 files are available now via Google and AWS. As mentioned above, we now provide much of the same information in an alternative format that is appropriate particularly for machine-learning applications.
- Keyword:
- data assimilation, Zarr, weather, forecasts, high resolution rapid refresh, and numerical weather prediction
- Subject:
- atmospheric science
- Creator:
- Horel, John and Blaylock, Brian
- Contributor:
- University of Utah Center for High Performance Computing, NOAA Earth Systems Research Laboratory, Amazon Open Data Program, and NOAA Environmental Modeling Center
- Depositor:
- BRIAN MCBRIDE
- Owner:
- JOHN HOREL
- Based Near Label Tesim:
- Alaska, Alaska, United States and United States, , United States
- Language:
- binary and English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/18/2024
- Date Created:
- 2015-04-18 to 2019-07-10
- License:
- CC BY – Allows others to use and share your data, even commercially, with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://dx.doi.org/10.7278/S5JQ0Z5B
-
- Description:
- This dataset contains the electric field data sampled along ocean-continent boundaries during space weather hazards. A finite-difference time-domain (FDTD) technique is used to study potential space weather hazards to electric power grids located at the proximity of the coast. The most of the data are in floating point representation, and the data files are in .txt format. The data can be visualized using software such as MATLAB and Python. The data can be used to plot electric and magnetic fields along the ocean-continent boundaries for different scenarios (different depths of an ocean, different conductivities of a lithosphere and different frequencies of ionospheric disturbance).
- Keyword:
- electric field
- Subject:
- space weather and electric field
- Creator:
- Pokhrel, Santosh
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/18/2024
- Date Created:
- 2016-08-01 to 2018-01-31
- License:
- CCO – As the data author, you are choosing to place your data into the public domain.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5PC30H5
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Data for: Restitution Characteristics of His Bundle and Working Myocardium in Isolated Rabbit Hearts
- Description:
- The Purkinje system (PS) and the His bundle have been recently implicated as an important driver of the rapid activation rate after 1-2 minutes of ventricular fibrillation (VF). It is unknown whether activations during VF propagate through the His-Purkinje system to other portions of the the working myocardium (WM). Little is known about restitution characteristic differences between the His bundle and working myocardium at short cycle lengths. In this study, rabbit hearts (n=9) were isolated, Langendorff- perfused, and electromechanically uncoupled with blebbistatin (10 μM). Pacing pulses were delivered directly to the His bundle. By using standard glass microelectrodes, action potentials duration (APD) from the His bundle and WM were obtained simultaneously over a wide range of stimulation cycle lengths (CL). The global F-test indicated that the two restitution curves of the His bundle and the WM are statistically significantly different (P<0.05). Also, the APD of the His bundle was significantly shorter than that of WM throughout the whole pacing course (P<0.001). The CL at which alternans developed in the His bundle vs. the WM were shorter for the His bundle (134.2±13.1ms vs. 148.3±13.3ms, P<0.01) and 2:1 block developed at a shorter CL in the His bundle than in WM (130.0±10.0 vs. 145.6±14.2ms, P<0.01). The His bundle APD was significantly shorter than that of WM under both slow and rapid pacing rates, which suggest that there may be an excitable gap during VF and that the His bundle may conduct wavefronts from one bundle branch to the other at short cycle lengths and during VF.
- Keyword:
- ventricular fibrillation, action potential duration, cardiology, working myocardium, rabbit, restitution curve, alternans, His bundle, and microelectrode
- Subject:
- ventricular fibrillation, cardiology, and myocardium
- Creator:
- Huang, Shangwei, Panitchob, Nuttanont, Hu, Nan, Ranjan, Ravi, Huang, Liqun, and Dosdall, Derek
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City, Utah, United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/18/2024
- Date Created:
- 2016-03-21 to 2016-05-25
- License:
- CCO – As the data author, you are choosing to place your data into the public domain.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50R9MJX
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- Description:
- Supplementary material for a research paper submitted to the Journal of Applied Meteorology and Climatology. An animated gif and a readme file.
- Keyword:
- weather, flow, animation, Meteor Craterkatabatic flow, hydraulic jump, potential temperature profile, IOP7, METCRAX, basin, and cold intrusions
- Subject:
- Windstorm dynamics and Meteorological modeling
- Creator:
- Lehner, M., Kalthoff, N, Haiden, T., Whiteman, C. David, Adler, B., and Hoch, S. W.
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Meteor Crater, Arizona, United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/18/2024
- Date Created:
- 2017-10-10
- License:
- Public Domain – This data is free of copyright restrictions (e.g. government sponsored data).
- Resource Type:
- Image
- Identifier:
- https://doi.org/10.7278/S54J0C86
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- Description:
- National aggregation of patient care reports associated with 9-1-1 activations for emergency care. Go to www.nemesis.org for details.
- Keyword:
- national data, pre-hospital, paramedic, Emergency Medical Services, 9-1-1, Emergency Care, and 911
- Subject:
- Emergency Medical Care
- Creator:
- Office of EMS, U.S. Department of Transportation, and National Highway Safety Administration
- Contributor:
- NEMSIS Technical Assistance Center
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- United States, , United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/16/2024
- Date Created:
- 2015-01-01 to 2015-12-31
- License:
- Other – See README file for more information.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5SX6BC3
-
- Description:
- The mechanisms governing tree drought mortality and recovery remain a subject of inquiry and active debate given their role in the terrestrial carbon cycle and their concomitant impact on climate change. Counter-intuitively, many trees do not die during the drought itself. Indeed, observations globally have documented that trees often grow for several years after drought before mortality. A combination of meta-analysis and tree physiological models demonstrate that optimal carbon allocation after drought explains observed patterns of delayed tree mortality and provides a predictive recovery framework. Specifically, post-drought, trees attempt to repair water transport tissue and achieve positive carbon balance through regrowing drought-damaged xylem. Further, the number of years of xylem regrowth required to recover function increases with tree size, explaining why drought mortality increases with size. These results indicate that tree resilience to drought-kill may increase in the future, provided that CO2 fertilization facilitates more rapid xylem regrowth.
- Keyword:
- drought, optimality theory, vegetation model, CO2 fertilization, hydraulic-carbon coupling, and carbon metabolism
- Subject:
- droughts and vegetation
- Creator:
- Medvigy, D., Anderegg, W. R. L., Detto, M., Bartlett, M. K., Pacala, S. W., Schwalm, C., Schahher, B., and Trugman, Anna T.
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/17/2024
- Date Created:
- Spring 2018
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5N29V4F
-
- Description:
- Background: To assess the demographic and attitudinal factors associated with HPV vaccine initiation and completion among 18–26 year old women in Utah. Method: Between January 2013 and December 2013, we surveyed 325 women from the University of Utah Community Clinics about their HPV vaccine related beliefs and behaviors. Odds ratios (ORs) were estimated from logistic regression models to identify variables related to HPV vaccine initiation and series completion. Results: Of the 325 participants, 204 (62.8 %) had initiated the vaccine and 159 (48.9 %) had completed the 3-dose series. The variables associated with HPV vaccine initiation were lower age (OR = 1.18 per year); being unmarried (OR = 3.62); not practicing organized religion (OR = 2.40); knowing how HPV spreads (OR = 6.29); knowing the connection between HPV and cervical cancer (OR = 3.90); a belief in the importance of preventive vaccination (OR = 2.45 per scale unit); strength of doctor recommendation (OR = 1.86 per scale unit); and whether a doctor’s recommendation was influential (OR = 1.70 per scale unit). These variables were also significantly associated with HPV vaccine completion. Conclusion: The implications of these findings may help inform policies and interventions focused on increasing HPV vaccination rates among young women. For example, without this information, programs might focus on HPV awareness; however, the results of this study illustrate that awareness is already high (near saturation) in target populations and other factors, such as strong and consistent physician recommendations, are more pivotal in increasing likelihood of vaccination. Additionally, our findings indicate the need for discussions of risk assessment be tailored to the young adult population.
- Keyword:
- immunization, Gardasil, vaccination, human papillomavirus, HPV, completion, intention, and vaccine series
- Subject:
- Papillomavirus Vaccines and Patient Compliance
- Creator:
- Kepka, Deanna and Wilson, Andrew
- Contributor:
- University of Utah Primary Care Research Network, Huntsman Cancer Institute, and Huntsman Cancer Foundation
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Utah, Utah, United States and Utah, Utah, United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/17/2024
- Date Created:
- 2013-01-01 to 2013-12-31
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S53B5X9S
-
- Description:
- Current treatments for methicillin-resistant Staphylococcus aureus (MRSA) infections require intravenously delivered vancomycin; however, systemically delivered vancomycin has its problems. To determine the feasibility and safety of locally delivering vancomycin hydrochloride (~25 mg/Kg) to the medullary canal of long bones, we conducted a pharmacokinetics study using a rat tibia model. We found that administering the vancomycin intraosseously resulted in very low concentrations of vancomycin in the blood plasma and the muscle surrounding the tibia, reducing the risk for systemic toxicity, which is often seen with traditional intravenous administration of vancomycin. Additionally, we were able to inhibit the development of osteomyelitis in the tibia if the treatment was administered locally at the same time as a bacterial inoculum (i.e., Log10 7.82 CFU/mL or 6.62x107 CFU/mL), when compared to an untreated group. These findings suggest that local intramedullary vancomycin delivery can achieve sufficiently high local concentrations to prevent development of osteomyelitis while minimizing systemic toxicity.
- Keyword:
- pharmacokinetics, tibia, infections, systematic toxicity, bone, antibiotics, rat, osteomyelitis, and vancomycin
- Subject:
- Infectious Diseases
- Creator:
- Loc-Carrillo, Catherine
- Contributor:
- Wu, Sijia, Fernandez, Sheena, Burr, Michael, Fredricksen, Hunter, Canden, Ahranee, Hoerger, Kelly, Churchill, John, Wang, Caroline, and Agarwal, Jay
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City, Utah, United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 04/16/2024
- Date Created:
- 2013-05-01 to 2015-01-30
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5W0942B
-
- Description:
- We analyzed 4,754 broadband seismic recordings of the SKS, SKKS, and SPdKS wavefield from 13 high quality events sampling the Samoa ultralow-velocity zone (ULVZ). We measured differential travel-times and amplitudes between the SKKS and SKS arrivals, which are highly sensitive to the emergence of the SPdKS seismic phase, which is in turn highly sensitive to lowermost mantle velocity perturbations such as generated by ULVZs. We modeled these data using a 2-D axi-symmetric waveform modeling approach and are able to explain these data with a single ULVZ. In order to predict both travel-time and amplitude perturbations we found that a large ULVZ length in the great circle arc direction on the order of 10° or larger is required. The large ULVZ length limits acceptable ULVZ elastic parameters. Here we find that δVS and δVP reductions from 20% to 22% and 15% to 17% respectively gives us the best fit, with a thickness of 26 km. Initial 3-D modeling efforts do not recover the extremes in the differential measurements, demonstrating that 3-D effects are important and must be considered in the future. However, the 3-D modeling is generally consistent with the velocity reductions recovered with the 2-D modeling. These velocity reductions are compatible with a compositional component to the ULVZ. Furthermore, geodynamic predictions for a compositional ULVZ that is moving predict a long linear shape similar to the shape of the Samoa ULVZ we confirm in this study. and This collection includes radial component displacement seismograms in the time window including the SKS, SKKS and SPdKS seismic arrivals. These data all interact with the Samoa ultra-low velocity zone at the core-mantle boundary. All data used in the study of Krier et al., 2021 (JGR) is included in this collection.
- Subject:
- Geology, seismology, and Geophysics
- Creator:
- Michael S. Thorne, Tarje Nissen-Meyer, Justin D. Krier, and Kuangdai Leng
- Owner:
- Michael Thorne
- Based Near Label Tesim:
- Tonga Trench, , Tonga
- Language:
- English
- Date Uploaded:
- 02/17/2021
- Date Modified:
- 12/09/2021
- Date Created:
- January 2019 to January 2020
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50DT3X22GGB