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1. Data from ‘Optimising tip diameter in phacoemulsification of varying lens sizes: an in vitro study’
- Description:
- Background: The objective of this study was to evaluate the effect of utilising larger lens cubes on phacoemulsification efficiency and chatter using 3 tips of different sizes and 2 ultrasound (US) approaches. Methods: This was an in vitro laboratory study conducted at the John A. Moran Eye Center Laboratory, University of Utah, Salt Lake City, UT, USA. Porcine lens nuclei were formalin-soaked for 2 hours, then divided into either 2.0 mm or 3.0 mm cubes. 30 degree bent 19 G, 20 G, and 21 G tips were used with a continuous torsional US system; and straight 19 G, 20 G, and 21 G tips were used with a micropulse longitudinal US system. Efficiency and chatter were determined. Results: Mean phacoemulsification removal time was higher with the 3.0 mm lens cube for all US variations and tip sizes. There were statistically significant differences between the 19 G and 21 G tips with micropulse longitudinal US using the 2.0 mm lens cube and the 3.0 mm lens cube, as well as with continuous transversal US using the 2.0 mm lens cube and the 3.0 mm lens cube. There was no significant difference between 19 G and 20 G tips with either lens cube size in either US approach. However, using both US approaches, trends were identical for both lens cube sizes in which the 19 G tips performed better than the 20 G and 21 G tips. Conclusion: Regardless of lens size, the 19 G needle was the most efficient, with the fewest outliers and smallest standard deviations.
- Keyword:
- cataract, porcine, vacuum, lens size, ultrasound, and phacoemulsification
- Subject:
- ophthalmology
- Creator:
- Zaugg, Brian, Bernhisel, Ashlie A., Barlow, William R., Ramshekar, Aniket, Olson, Randall J., Heczko, Joshua B., and Pettey, Jeff H.
- Depositor:
- Susan Schulman
- Owner:
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 11/26/2019
- Date Modified:
- 11/26/2019
- Date Created:
- 20180201 - 20180204
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/doi:10.7278/S50D-ZTWP-VF00
- Description:
- Localization of the components of the cardiac conduction system (CCS) is essential for many therapeutic procedures in cardiac surgery and interventional cardiology. While histological studies provided fundamental insights into CCS localization, this information is incomplete and difficult to translate to aid in intraprocedural localization. To advance our understanding of CCS localization, we set out to establish a framework for quantifying nodal region morphology. Using this framework, we quantitatively analyzed the sinoatrial node (SAN) and atrioventricular node (AVN) in ovine with menstrual age ranging from 4.4 to 58.3 months. In particular, we studied the SAN and AVN in relation to the epicardial and endocardial surfaces, respectively. Using anatomical landmarks, we excised the nodes and adjacent tissues, sectioned those at a thickness of 4 µm at 100 µm intervals, and applied Masson’s trichrome stain to the sections. These sections were then imaged, segmented to identify nodal tissue, and analyzed to quantify nodal depth and superficial tissue composition. The minimal SAN depth ranged between 20 and 926 µm. AVN minimal depth ranged between 59 and 1192 µm in the AVN extension region, 49 and 980 µm for the compact node, and 148 and 888 µm for the transition to His Bundle region. Using a logarithmic regression model, we found that minimal depth increased logarithmically with age for the AVN (R2=0.818, P=0.002). Also, the myocardial overlay of the AVN was heterogeneous within different regions and decreased with increasing age. Age associated alterations of SAN minimal depth were insignificant. Our study presents examples of characteristic tissue patterns superficial to the AVN and within the SAN. We suggest that the presented framework provides quantitative information for CCS localization. Our studies indicate that procedural methods and localization approaches in regions near the AVN should account for the age of patients in cardiac surgery and interventional cardiology.
- Keyword:
- heart, Atrioventricular Node, Masson's Trichrome, AVN, cardiology, Sinoatrial Node, cardiac conduction system, physiology, and SAN
- Subject:
- cardiology and physiology
- Creator:
- Jordan Johnson, Frank Sachse, and Brian Cottle
- Owner:
- Language:
- English
- Date Uploaded:
- 11/13/2019
- Date Modified:
- 11/13/2019
- Date Created:
- 2018
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/doi:10.7278/S50D-546S-4RVW
- Description:
- : Forests play a major role in the global carbon cycle. Previous studies on the capacity of forests to sequester atmospheric CO2 have mostly focused on carbon uptake, but the roles of carbon turnover time and its spatiotemporal changes remain poorly understood. Here, we used long-term inventory data (1955-2018) from 695 mature forest plots to quantify temporal trends in living vegetation carbon turnover time across tropical, temperate, and cold climate zones, and compared plot data to eight Earth system models (ESMs). Long-term plots consistently showed decreases in living vegetation carbon turnover time, likely driven by increased tree mortality across all major climate zones. Changes in living vegetation carbon turnover time were negatively correlated with CO2 enrichment in both forest plot data and ESM simulations. However, plot-based correlations between living vegetation carbon turnover time and climate drivers such as precipitation and temperature diverged from those of ESM simulations. Our analyses suggest that forest carbon sinks are likely to be constrained by a decrease in living vegetation carbon turnover time, and accurate projections of forest carbon sink dynamics will require an improved representation of tree mortality processes and their sensitivity to climate in ESMs.
- Keyword:
- Carbon cycle, Climate change, Tree mortality, Forest carbon stocks, earth system models, Forest productivity, tropical climate zone, cold climate zone, Carbon turnover, and temperate climate zone
- Subject:
- Forestry
- Creator:
- Anderegg, William R.L., Schraub, Marcus, Yu, Kailiang, Gessler, Arthur, Penuelas, Josep, Cailleret, Maxine, Peng, Changhui, Condit, Richard, Ferretti, Marco, Hubbell, Stephen P., Smith, William K., Sardans, Jordi, Levanic, Tom, Zhu, Kai, and Trugman, Anna T.
- Owner:
- KAILIANG YU
- Language:
- English
- Date Uploaded:
- 10/24/2019
- Date Modified:
- 10/31/2019
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/doi:10.7278/S50D-D656-FSP2
- Keyword:
- planets and satellites: dynamical evolution, dwarf planets: Pluto, and planets and satellites: formation
- Creator:
- Bromley, Benjamin and Kenyon, Scott
- Owner:
- BENJAMIN BROMLEY
- Language:
- English
- Date Uploaded:
- 07/26/2019
- Date Modified:
- 07/26/2019
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Software or Program Code and Dataset
- Identifier:
- https://doi.org/10.7278/S50D-EFCY-ZC00
- Keyword:
- satellites, dynamical evolution, Astronomy, Charon, planets, NASA, stability, and Pluto
- Creator:
- Kenyon, Scott J. and Bromley, Benjamin C.
- Depositor:
- BRIAN MCBRIDE
- Owner:
- BENJAMIN BROMLEY
- Language:
- English
- Date Uploaded:
- 07/11/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 20180515-20181214
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Software or Program Code and Dataset
- Identifier:
- https://doi.org/10.7278/s50d-w273-1gg0
- Description:
- Future projections suggest an increase in drought globally with climate change. Current vegetation models typically regulate the plant photosynthetic response to soil moisture stress through an empirical function, rather than a mechanistic response where plant water potentials respond to changes in soil water. This representation of soil moisture stress may introduce significant uncertainty into projections for the terrestrial carbon cycle. We examined the use of the soil moisture limitation function in historical and future emissions scenarios in nine Earth system models. We found that soil moisture-limited productivity across models represented a large and uncertain component of the simulated carbon cycle, comparable to 3-286% of current global productivity. Approximately 40-80% of the intermodel variability was due to the functional form of the limitation equation alone. Our results highlight the importance of implementing mechanistic water limitation schemes in models and illuminate several avenues for improving projections of the land carbon sink.
- Keyword:
- carbon cycle, Gross primary productivity, soil moisture, Water limitation , Earth system modeling, and drought
- Creator:
- Medvigy, David, Mankin, Justin S., Anderegg, William R.L., and Trugman, Anna T.
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/11/2019
- Date Modified:
- 07/30/2019
- Date Created:
- Spring 2016
- License:
- CC BY – Allows others to use and share your data, even commercially, with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5707ZMS
7. Data for: Authigenic Mineral Textures in Submarine 1979 Basalt Drill Core, Surtsey Volcano, Iceland
- Description:
- Micrometer-scale maps of authigenic microstructures in submarine basaltic tuff from a 1979 Surtsey volcano, Iceland, drill core acquired 15 years after eruptions terminated describe the initial alteration of oceanic basalt in a low temperature hydrothermal system. An integrative investigative approach uses synchrotron source X-ray microdiffraction (µXRD), microfluoresence (µXRF), micro-computed tomography (µCT), and scanning transmission electron microscopy (S/TEM) coupled with Raman spectroscopy to create finely resolved spatial frameworks that record a continuum of alteration in glass and olivine. Micro-analytical maps of vesicular and fractured lapilli in specimens from 157.1, 137.9, and 102.6 m depth, and borehole temperatures of 83, 93.9 and 141.3 °C measured in 1980, respectively, describe the production of nanocrystalline clay mineral, zeolites, and Al-tobermorite in diverse microenvironments. Irregular alteration fronts at 157.1 m depth resemble microchannels associated with biological activity in older basalts. By contrast, linear microstructures with little resemblance to previously described alteration features have nanocrystalline clay mineral (nontronite) and zeolite (amicite) texture. The crystallographic preferred orientation rotates around an axis parallel to the linear feature. Raman spectra indicating degraded and poorly-ordered carbonaceous matter of possible biological origin are associated with nanocrystalline clay mineral in a crystallographically-oriented linear microstructure in altered olivine at 102.6 m and with sub-circular nanoscale cavities in altered glass at 137.9 m depth. Although evidence for biotic processes is inconclusive, the integrated analyses describe the complex organization of previously unrecognized mineral texture in very young basalt. They provide a foundational mineralogical reference for longitudinal, time-lapse characterizations of palagonitized basalt in oceanic environments.
- Keyword:
- Surtsey volcano , X-ray microdiffraction, Glass alteration, Micrometer-scale maps, and Submarine basalt
- Creator:
- Parkinson, Dula, Stan, Camelia V. , Tamura, Nobumichi, Miyagi, Lowell M. , Moore, James G. , Couper, Samantha, Jackson, Marie D., Czabaj, Michael W., and Ivarsson, Magnus
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Surtsey
- Language:
- English
- Date Uploaded:
- 07/11/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 2016-2019
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50D-VJND-8V00
- Description:
- -------------------------- METHODOLOGICAL INFORMATION -------------------------- 1. Description of methods used for collection/generation of data: The data were generated by computer simulations using the C++ code "Orchestra", a proprietary hybrid code that follows the dynamical evolution of solids and gas orbiting a central object. Algorithms in the code are described in the following papers (author names abbreviated to B for Bromley, K for Kenyon, and L for Jane X Luu along with a year for publication date, AJ = Astronomical Journal, ApJ = Astrophysical Journal, S=Supplement): KL1998, AJ 115:2136; KL1999, AJ 118:1101; KB2001,AJ 121:538; KB2002,AJ 123:1757; KB2004, AJ 127:513; BK2006, AJ 131:2737; KB2006, AJ 131:1837; KB2008, ApJS 179:451; KB2010, ApJS 188:242; BK2011, ApJ 731:101; KB2012, AJ 143:63; KB2014, AJ 147:8. Initial conditions for these simulations described in the published paper. 2. Methods for processing the data: Various C and fortran programs are used to analyze the data for the calculations. Several C programs needed to extract information from the computer generated binary output files are included with the dataset. The C programs include basic summaries of the structure of the data files and the usage to extract data from each binary file. 3. Instrument- or software-specific information needed to interpret the data: Appropriate software is included in directory. 4. Standards and calibration information, if appropriate: none 5. Environmental/experimental conditions: all calculations were run on the NASA discover cluster 6. Describe any quality-assurance procedures performed on the data: Aside from tests summarized in the papers described in item 1, test calculations are summarized in the Appendix of each paper and compared to an appropriate benchmark. 7. People involved with sample collection, processing, analysis and/or submission: Scott Kenyon and Ben Bromley and --------------------- DATA & FILE OVERVIEW --------------------- Files summarized in items 1-8 are binary output files from n-body simulations as described in Kenyon & Bromley, "A Pluto-Charon Sonata: Dynamical Limits on fate Masses of the Small Satellites" (2019, Astronomical Journal). Files described in item 9 are ascii txt. The C programs in items 10, 11, and 12 provide different ways to access the binary output. Each C program describes the architecture of the binary files. 1. pcs2-0mmm-nnn[a-z] files: heavy satellites, mmm = 100 x mass factor for all satellites, nnn = number of Symplectic steps per PC orbit, a-z = version 2. pcs2-1mmm-nnn[a-z] files: light satellites, mmm = 100 x mass factor for all satellites, nnn = number of Symplectic steps per PC orbit, a-z = version 3. pcs2-2mmm-nnn[a-z] files: light satellites with 2x nominal mass of Styx & Kerberos, mmm = 100 x mass factor for all satellites, nnn = number of Symplectic steps per PC orbit, a-z = version 4. pcs2-3mmm: heavy satellites, 40 Symplectic steps per PC orbit, mmm = 100 x mass factor for Nix only 5. pcs2-4mmm: heavy satellites, 40 Symplectic steps per PC orbit, mmm = 100 x mass factor for Kerberos only 6. pcs2-5mmm: heavy satellites, 40 Symplectic steps per PC orbit, mmm = 100 x mass factor for Hydra only 7. pcs2-6mmm light satellites, 40 Symplectic steps per PC orbit, mmm = 100 x mass factor for Nix only 8. pcs2-7mmm: light satellites, 40 Symplectic steps per PC orbit, mmm = 100 x mass factor for Hydra only 9. pcs2-n000.dat: summary of lifetimes for binary files in each archive 10. lifetime.c: summarizes lifetime and mass factor for binary file usage example: "lifetime pcs2-6110" 11. summary.c: generates basic summary of timesteps in a binary file usage example: "summary pcs1-0013d" 12. extrxyz.c: extracts (x,y,z) for N satellites and outputs (x,y,z) usage example: "extr6d pcs1-6110 6" will output (x,y,z) for SNKH 3. Additional related data collected that was not included in the current data package: There are other binary output files not included in this archive. 4. Are there multiple versions of the dataset? no
- Keyword:
- Pluto and Charon, dynamical evolution and stability, and planets and satellites
- Creator:
- Bromley, Benjamin and Kenyon, Scott
- Depositor:
- BRIAN MCBRIDE
- Owner:
- BENJAMIN BROMLEY
- Language:
- English
- Date Uploaded:
- 07/11/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 2018-2019
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50D-HAJT-E0G0
- Description:
- This project was a NSF-funded collaborative research project entitled: Collaborative Research: Deciphering Eolian Paleoenvironmental and Hydrodynamic records: Lower Jurassic Navajo Sandstone, Colorado Plateau, USA This was a multifaceted interdisciplinary study of the Lower Jurassic Navajo Sandstone (Ss)--a unique and distinctive unit in all of geologic history. This unit represents the largest known ancient desert (erg), and is typically classified as a record of a hyperarid environment. Furthermore, the Navajo Ss was deposited at a time when mammals were undergoing their first major diversification, and dinosaurs began to dominate the landscape in number and diversity. Our goal was to examine sedimentary features of the erg margin that recorded the active paleohydrology of the desert regime, and examine abundant trace- and body-fossil material to more fully document the structure and evolution of the biota in a variably arid landscape through Navajo Ss deposition. Field studies involved sedimentology and paleoecology. Laboratory studies involved isotope geochemistry of carbonate deposits, as well as thin section petrography.
- Keyword:
- geology, Utah, field study, sedimentology, Jurassic Navajo Sandstone, paleoecology, eolian, and Moab
- Creator:
- Chan, Marjorie A.
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Moab
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- May 2015-May 2017
- License:
- Public Domain – This data is free of copyright restrictions (e.g. government sponsored data).
- Resource Type:
- Dataset
- Identifier:
- https://doi:10.7278/S50D-D7DX-GJG0
10. Data to support: Phylogenetic and biogeographic controls of plant nighttime stomatal conductance
- Description:
- The widely documented phenomenon of nighttime stomatal conductance (gsn) could lead to substantial water loss with no carbon gain, and thus it remains unclear whether nighttime stomatal conductance confers a functional advantage. Given that studies of gsn have focused on controlled environments or small numbers of species in natural environments, a broad phylogenetic and biogeographic context could provide insights into potential adaptive benefits of gsn. • We measured gsn on a diverse suite of species (n = 73) across various functional groups and climates-of-origin in a common garden to study the phylogenetic and biogeographic/climatic controls on gsn and further assessed the degree to which gsn co-varied with leaf functional traits and daytime gas exchange rates. • Closely related species were more similar in gsn than expected by chance. Herbaceous species had higher gsn than woody species. Species that typically grow in climates with lower mean annual precipitation – where the fitness cost of water loss should be the highest – generally had higher gsn. • Our results reveal the highest gsn rates in species from environments where neighboring plants compete most strongly for water, suggesting a possible role for the competitive advantage of gsn.
- Keyword:
- biogeographic, climate controls, water resource, gas exchange, woody species, phylogenetic, nighttime stomata, adaption, competition, and herbaceous species
- Creator:
- Yu, Kailiang and Anderegg, William
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 2018 May through August
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50D-E9J1-NYG0
11. Supporting data for 'Tree carbon allocation explains forest drought-kill and recovery patterns'.
- Description:
- The mechanisms governing tree drought mortality and recovery remain a subject of inquiry and active debate given their role in the terrestrial carbon cycle and their concomitant impact on climate change. Counter-intuitively, many trees do not die during the drought itself. Indeed, observations globally have documented that trees often grow for several years after drought before mortality. A combination of meta-analysis and tree physiological models demonstrate that optimal carbon allocation after drought explains observed patterns of delayed tree mortality and provides a predictive recovery framework. Specifically, post-drought, trees attempt to repair water transport tissue and achieve positive carbon balance through regrowing drought-damaged xylem. Further, the number of years of xylem regrowth required to recover function increases with tree size, explaining why drought mortality increases with size. These results indicate that tree resilience to drought-kill may increase in the future, provided that CO2 fertilization facilitates more rapid xylem regrowth.
- Keyword:
- optimality theory, hydraulic-carbon coupling, vegetation model, drought, CO2 fertilization, and carbon metabolism
- Creator:
- Detto, M., Anderegg, W. R. L., Schwalm, C., Medvigy, D., Bartlett, M. K., Schahher, B., Trugman, Anna T., and Pacala, S. W.
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- Spring 2018
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5N29V4F
12. BIG-LoVE data
- Description:
- Background. Common cold viruses create significant health and financial burdens, and understanding key loci of transmission would help focus control strategies. This study (1) examines factors that influence when individuals transition from a negative to positive test (acquisition) or a positive to negative test (loss) of rhinovirus (HRV) and other respiratory tract viruses in 26 households followed weekly for one year, (2) investigates evidence for intrahousehold and interhousehold transmission and the characteristics of individuals implicated in transmission, and (3) builds data-based simulation models to identify factors that most strongly affect patterns of prevalence. Methods. We detected HRV, coronavirus, paramyxovirus, influenza and bocavirus with the FilmArray polymerase chain reaction (PCR) platform (BioFire Diagnostics, LLC). We used logistic regression to find covariates affecting acquisition or loss of HRV including demographic characteristics of individuals, their household, their current infection status, and prevalence within their household and across the population. We apply generalized linear mixed models to test robustness of results. Results. Acquisition of HRV was less probable in older individuals and those infected with a coronavirus, and higher with a higher proportion of other household members infected. Loss of HRV is reduced with a higher proportion of other household members infected. Within households, only children and symptomatic individuals show evidence for transmission, while between households only a higher number of infected older children (ages 5-19) increases the probability of acquisition. Coronaviruses, paramyxoviruses and bocavirus also show evidence of intrahousehold transmission. Simulations show that age-dependent susceptibility and transmission have the largest effects on mean HRV prevalence. Conclusions. Children are most likely to acquire and most likely to transmit HRV both within and between households, with infectiousness concentrated in symptomatic children. Simulations predict that the spread of HRV and other respiratory tract viruses can be reduced but not eliminated by practices within the home.
- Keyword:
- longitudinal study, respiratory tract virus, Utah, respiratory disease, coronavirus, viral interactions, viral epidemiology, epidemiology, and rhinovirus
- Creator:
- Adler, Frederick R.
- Contributor:
- Pavia, Andrew, Byington, Carrie L., and Ampofo, Krow
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- August 2009 - August 2010
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5XG9P97
- Description:
- The data set includes individual images of mouse cochleae, both scanning electron micrographs and fluorescent micrographs, used to generate aggregated data described in Ali A. Almishaal; Phayvanh P. Sjogren; Pranav D. Mathur; Elaine Hillas;Taelor Johnson; Melissa S. Price; Travis Haller; Jun Yang; Namakkal S. Rajasekaran; Matthew A. Firpo; Albert H. Park (2018) "Reactive Oxygen Species and Hearing Loss in Murine CMV Labyrinthitis".
- Keyword:
- congenital CMV, antioxidant, cytomegalovirus, cochlea, reactive oxygen species, outer hair cells, auditory brainstem response, mouse, hearing loss, distortion-product otoacoustic emissions, and herpesviridae
- Creator:
- Firpo, Matthew A.
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 04082015-11022016
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50D-D0WT-SV00
- Keyword:
- Climate, Clouds, Statistics, and Atmospheric Sciences
- Creator:
- Garrett, Tim
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5CV4FWW
- Description:
- This dataset contains the electric field data sampled along ocean-continent boundaries during space weather hazards. A finite-difference time-domain (FDTD) technique is used to study potential space weather hazards to electric power grids located at the proximity of the coast. The most of the data are in floating point representation, and the data files are in .txt format. The data can be visualized using software such as MATLAB and Python. The data can be used to plot electric and magnetic fields along the ocean-continent boundaries for different scenarios (different depths of an ocean, different conductivities of a lithosphere and different frequencies of ionospheric disturbance).
- Keyword:
- Electric field
- Creator:
- Pokhrel, Santosh
- Owner:
- BRIAN MCBRIDE
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- Aug 2016 to Jan 2018
- License:
- Public Domain – This data is free of copyright restrictions (e.g. government sponsored data).
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5PC30H5
16. Data for: Restitution Characteristics of His Bundle and Working Myocardium in Isolated Rabbit Hearts
- Description:
- The Purkinje system (PS) and the His bundle have been recently implicated as an important driver of the rapid activation rate after 1-2 minutes of ventricular fibrillation (VF). It is unknown whether activations during VF propagate through the His-Purkinje system to other portions of the the working myocardium (WM). Little is known about restitution characteristic differences between the His bundle and working myocardium at short cycle lengths. In this study, rabbit hearts (n=9) were isolated, Langendorff- perfused, and electromechanically uncoupled with blebbistatin (10 μM). Pacing pulses were delivered directly to the His bundle. By using standard glass microelectrodes, action potentials duration (APD) from the His bundle and WM were obtained simultaneously over a wide range of stimulation cycle lengths (CL). The global F-test indicated that the two restitution curves of the His bundle and the WM are statistically significantly different (P<0.05). Also, the APD of the His bundle was significantly shorter than that of WM throughout the whole pacing course (P<0.001). The CL at which alternans developed in the His bundle vs. the WM were shorter for the His bundle (134.2±13.1ms vs. 148.3±13.3ms, P<0.01) and 2:1 block developed at a shorter CL in the His bundle than in WM (130.0±10.0 vs. 145.6±14.2ms, P<0.01). The His bundle APD was significantly shorter than that of WM under both slow and rapid pacing rates, which suggest that there may be an excitable gap during VF and that the His bundle may conduct wavefronts from one bundle branch to the other at short cycle lengths and during VF.
- Keyword:
- ventricular fibrillation, action potential duration, cardiology, working myocardium, rabbit, restitution curve, alternans, His bundle, and microelectrode
- Creator:
- Ranjan, Ravi, Panitchob, Nuttanont, Huang, Shangwei, Huang, Liqun, Dosdall, Derek, and Hu, Nan
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 20160321 to 20160525
- License:
- CCO – As the data author, you are choosing to place your data into the public domain.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S50R9MJX
- Keyword:
- ophthalmology, retina, vitreous, adhesion, ocular, human, eye, peel test, and sheep
- Subject:
- Quantitative measurements of vitreoretinal adhesion in ovine and human subjects as a function of age and region
- Creator:
- Creveling, Christopher and Coats, Brittany
- Contributor:
- Colter, Jourdan
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- data collection completed June 1, 2017
- License:
- CC BY – Allows others to use and share your data, even commercially, with attribution.
- Resource Type:
- Image, Video, and Dataset
- Identifier:
- https://doi.org/10.7278/S5BK19H3
- Description:
- Weather-related research often requires synthesizing vast amounts of data that need archival solutions that are both economical and viable during and past the lifetime of the project. Public cloud computing services (e.g., from Amazon, Microsoft, or Google) or private clouds managed by research institutions are providing object data storage systems potentially appropriate for long-term archives of such large geophysical data sets. We illustrate the use of a private cloud object store developed by the Center for High Performance Computing (CHPC) at the University of Utah. Since early 2015, we have been archiving thousands of two-dimensional gridded fields (each one containing over 1.9 million values over the contiguous United States) from the High-Resolution Rapid Refresh (HRRR) data assimilation and forecast modeling system. The archive is being used for retrospective analyses of meteorological conditions during high-impact weather events, assessing the accuracy of the HRRR forecasts, and providing initial and boundary conditions for research simulations. The archive is accessible interactively and through automated download procedures for researchers at other institutions that can be tailored by the user to extract individual two-dimensional grids from within the highly compressed files. Characteristics of the CHPC object storage system are summarized relative to network file system storage or tape storage solutions. The CHPC storage system is proving to be a scalable, reliable, extensible, affordable, and usable archive solution for our research.
- Keyword:
- weather, analyses, forecasts, atmospheric science, numerical weather prediction, and data assimilation
- Subject:
- atmospheric science and numerical weather prediction
- Creator:
- Horel, John and Blaylock, Brian
- Contributor:
- University of Utah Center for High Performance Computing, NOAA Earth Systems Research Laboratory, and NOAA Environmental Modeling Center
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Alaska and United States
- Language:
- English and binary
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- April 18, 2015 to present
- License:
- CC BY – Allows others to use and share your data, even commercially, with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5JQ0Z5B
- Description:
- Background: To assess the demographic and attitudinal factors associated with HPV vaccine initiation and completion among 18–26 year old women in Utah. Method: Between January 2013 and December 2013, we surveyed 325 women from the University of Utah Community Clinics about their HPV vaccine related beliefs and behaviors. Odds ratios (ORs) were estimated from logistic regression models to identify variables related to HPV vaccine initiation and series completion. Results: Of the 325 participants, 204 (62.8 %) had initiated the vaccine and 159 (48.9 %) had completed the 3-dose series. The variables associated with HPV vaccine initiation were lower age (OR = 1.18 per year); being unmarried (OR = 3.62); not practicing organized religion (OR = 2.40); knowing how HPV spreads (OR = 6.29); knowing the connection between HPV and cervical cancer (OR = 3.90); a belief in the importance of preventive vaccination (OR = 2.45 per scale unit); strength of doctor recommendation (OR = 1.86 per scale unit); and whether a doctor’s recommendation was influential (OR = 1.70 per scale unit). These variables were also significantly associated with HPV vaccine completion. Conclusion: The implications of these findings may help inform policies and interventions focused on increasing HPV vaccination rates among young women. For example, without this information, programs might focus on HPV awareness; however, the results of this study illustrate that awareness is already high (near saturation) in target populations and other factors, such as strong and consistent physician recommendations, are more pivotal in increasing likelihood of vaccination. Additionally, our findings indicate the need for discussions of risk assessment be tailored to the young adult population.
- Keyword:
- Completion, HPV, Immunization, Intention, Human Papillomavirus, Vaccine series, Gardasil, and Vaccination
- Subject:
- Patient Compliance and Papillomavirus Vaccines
- Creator:
- Wilson, Andrew and Kepka, Deanna
- Contributor:
- Huntsman Cancer Foundation, Huntsman Cancer Institute, and University of Utah Primary Care Research Network
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Utah and Utah
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 20130101 to 20131231
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S53B5X9S
- Description:
- National aggregation of patient care reports associated with 9-1-1 activations for emergency care.
- Keyword:
- Emergency Care, 911, Paramedic, National Data, 9-1-1, Emergency Medical Services, and Pre-hospital
- Subject:
- Emergency Medical Care
- Creator:
- National Highway Safety Administration, U.S. Department of Transportation, and Office of EMS
- Contributor:
- NEMSIS Technical Assistance Center
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- United States
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 2015
- License:
- Other – See README file for more information.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5SX6BC3
- Description:
- Current treatments for methicillin-resistant Staphylococcus aureus (MRSA) infections require intravenously delivered vancomycin; however, systemically delivered vancomycin has its problems. To determine the feasibility and safety of locally delivering vancomycin hydrochloride (~25 mg/Kg) to the medullary canal of long bones, we conducted a pharmacokinetics study using a rat tibia model. We found that administering the vancomycin intraosseously resulted in very low concentrations of vancomycin in the blood plasma and the muscle surrounding the tibia, reducing the risk for systemic toxicity, which is often seen with traditional intravenous administration of vancomycin. Additionally, we were able to inhibit the development of osteomyelitis in the tibia if the treatment was administered locally at the same time as a bacterial inoculum (i.e., Log10 7.82 CFU/mL or 6.62x107 CFU/mL), when compared to an untreated group. These findings suggest that local intramedullary vancomycin delivery can achieve sufficiently high local concentrations to prevent development of osteomyelitis while minimizing systemic toxicity.
- Keyword:
- infections, bone, antibiotics, and pharmacokinetics
- Subject:
- Infectious Diseases
- Creator:
- Loc-Carrillo, Catherine
- Contributor:
- Fernandez, Sheena, Wu, Sijia, Canden, Ahranee, Wang, Caroline, Burr, Michael, Hoerger, Kelly, Churchill, John, Fredricksen, Hunter, and Agarwal, Jay
- Owner:
- BRIAN MCBRIDE
- Based Near Label Tesim:
- Salt Lake City
- Language:
- English
- Date Uploaded:
- 07/10/2019
- Date Modified:
- 07/30/2019
- Date Created:
- 2013/05/01 - 2015/01/30
- License:
- CC BY NC - Allows others to use and share your data non-commercially and with attribution.
- Resource Type:
- Dataset
- Identifier:
- https://doi.org/10.7278/S5W0942B